Structure of PDB 3isz Chain B

Receptor sequence
>3iszB (length=366) Species: 71421 (Haemophilus influenzae Rd KW20) [Search protein sequence]
MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLN
LWAKHGTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAAD
MKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLM
ARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQGIQPHLAENPI
HKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAGVIPAELYIQFNLRYC
TEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLTKPGKLLDSITSAIE
ETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNSTIHKVNECVSVEDL
GKCGEIYHKMLVNLLD
3D structure
PDB3isz Structural basis for catalysis by the mono- and dimetalated forms of the dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase.
ChainB
Resolution2.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.5.1.18: succinyl-diaminopimelate desuccinylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B H67 D100 E163 H67 D100 E163
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding
GO:0009014 succinyl-diaminopimelate desuccinylase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
GO:0050897 cobalt ion binding
Biological Process
GO:0009085 lysine biosynthetic process
GO:0009089 lysine biosynthetic process via diaminopimelate
GO:0019877 diaminopimelate biosynthetic process
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3isz, PDBe:3isz, PDBj:3isz
PDBsum3isz
PubMed20138056
UniProtP44514|DAPE_HAEIN Succinyl-diaminopimelate desuccinylase (Gene Name=dapE)

[Back to BioLiP]