Structure of PDB 3i46 Chain B

Receptor sequence
>3i46B (length=289) Species: 561307 (Staphylococcus aureus subsp. aureus RN4220) [Search protein sequence]
DLKLVSHNVYMLSTVLYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDNG
ASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKY
PIKEKIQHVFKSGCGFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRC
GAGHDRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVNKGTPEFKDML
KNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPK
QLVNEVVTEKPKPWDVYAAAYYYVYNDFSDHYPIKAYSK
3D structure
PDB3i46 Structure and biological activities of beta toxin from Staphylococcus aureus.
ChainB
Resolution2.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B D194 N196 H289 D186 N188 H281
BS02 CA B E53 D288 E45 D280
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004620 phospholipase activity
GO:0004767 sphingomyelin phosphodiesterase activity
GO:0008081 phosphoric diester hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0031640 killing of cells of another organism
Cellular Component
GO:0005576 extracellular region

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3i46, PDBe:3i46, PDBj:3i46
PDBsum3i46
PubMed
UniProtA7LAI8

[Back to BioLiP]