Structure of PDB 3dra Chain B

Receptor sequence
>3draB (length=364) Species: 5476 (Candida albicans) [Search protein sequence]
NQLLINKHEKFFNRCLIGLPSTAQSEDSNKLAIIYFCLHGLQLIQKFQFT
NQELIYYRNFIINQFMIENNQIISFRSTHYFQKTNQKYDCPNLSSTLFAL
YNLLILKSPYHTIINRKKIMNFLCKCQVKDGINKGGFVPTLYYNEENGDY
KQYGEPDLRVCYMALLIRHLMKYDTDIDLISLQQFILDRININGGFSSTI
MDESHLGFTFCAIASLKLLNYPLEKLKSTKEWLIHRQVDYPENLYPNYEY
YRNIDIGGFNGRENKLSDTCYSWWCTGSLYNIDVNFIKLVDLNKAEDYLL
NKTQNQLFGGFGRDPDSTPDPMHSYLALASLSLWNHEKFALQEINPILTI
TKESYQFFKEEIKY
3D structure
PDB3dra Structure of protein geranylgeranyltransferase-I from the human pathogen Candida albicans complexed with a lipid substrate.
ChainB
Resolution1.8 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B D294 C296 H349 D268 C270 H323
BS02 GRG B Y163 H219 G221 R288 K291 Y297 W300 R339 Y162 H205 G207 R262 K265 Y271 W274 R313
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Thu Feb 27 01:47:41 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '3dra', asym_id = 'B', title = 'Structure of protein geranylgeranyltransferase-I...andida albicans complexed with a lipid substrate.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='3dra', asym_id='B', title='Structure of protein geranylgeranyltransferase-I...andida albicans complexed with a lipid substrate.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003824,0004661,0005953,0008318,0018344', uniprot = '', pdbid = '3dra', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003824,0004661,0005953,0008318,0018344', uniprot='', pdbid='3dra', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>