Structure of PDB 3dme Chain B

Receptor sequence
>3dmeB (length=366) Species: 520 (Bordetella pertussis) [Search protein sequence]
TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIH
AGIYYPADSLKARLCVRGKHLLYEYCAARGVPHQRLGKLIVATSDAEASQ
LDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHAL
MLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLI
NAAGLHAPGLARRIEGIPRDSIPPEYLCKGSYFTLAGRAPFSRLIYPVPQ
HAGLGVHLTLDLGGQAKFGPDTEWIATEDYTLDPRRADVFYAAVRSYWPA
LPDGALAPGYTGIRPKISGPHEPAADFAIAGPASHGVAGLVNLYGIESPG
LTASLAIAEETLARLA
3D structure
PDB3dme Crystal structure of conserved exported protein from Bordetella pertussis. NorthEast Structural Genomics target BeR141
ChainB
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD B I10 G11 G13 V14 V15 E34 A35 T43 S44 R46 N47 S48 V50 H52 P172 L173 A205 Y234 I315 R316 I348 E349 S350 P351 G352 L353 T354 I8 G9 G11 V12 V13 E32 A33 T41 S42 R44 N45 S46 V48 H50 P170 L171 A203 Y232 I313 R314 I346 E347 S348 P349 G350 L351 T352
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0047545 2-hydroxyglutarate dehydrogenase activity

View graph for
Molecular Function
External links
PDB RCSB:3dme, PDBe:3dme, PDBj:3dme
PDBsum3dme
PubMed
UniProtQ7VU70

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