Structure of PDB 3d9k Chain B

Receptor sequence
>3d9kB (length=141) Species: 9606 (Homo sapiens) [Search protein sequence]
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKF
IQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLY
RCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAALEHH
3D structure
PDB3d9k Snapshots of the RNA Processing Factor SCAF8 Bound to Different Phosphorylated Forms of the Carboxyl-terminal Domain of RNA Polymerase II.
ChainB
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B D16 Y17 D16 Y17
BS02 peptide B M26 K31 Y64 D67 S68 R71 Q72 R112 L116 M26 K31 Y64 D67 S68 R71 Q72 R112 L116
External links
PDB RCSB:3d9k, PDBe:3d9k, PDBj:3d9k
PDBsum3d9k
PubMed18550522
UniProtQ9UPN6|SCAF8_HUMAN SR-related and CTD-associated factor 8 (Gene Name=SCAF8)

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