Structure of PDB 3bwv Chain B

Receptor sequence
>3bwvB (length=168) Species: 176280 (Staphylococcus epidermidis ATCC 12228) [Search protein sequence]
RQRIAIDMDEVLADTLGAVVKAVNERADLNIKMESLNGKKLGLVMDILKE
PGFFRNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYF
PFLDPQHFVFCGRKNIILADYLIDDNPKQLEIFEGKSIMFTASHNVYEHR
FERVSGWRDVKNYFNSIE
3D structure
PDB3bwv Crystal structure of deoxyribonucleotidase-like protein (NP_764060.1) from Staphylococcus epidermidis ATCC 12228 at 1.55 A resolution
ChainB
Resolution1.55 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D9 D11
Catalytic site (residue number reindexed from 1) D7 D9
Enzyme Commision number 3.1.3.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG B D9 D11 D135 D7 D9 D125
Gene Ontology
Molecular Function
GO:0008253 5'-nucleotidase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0009223 pyrimidine deoxyribonucleotide catabolic process
GO:0009264 deoxyribonucleotide catabolic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3bwv, PDBe:3bwv, PDBj:3bwv
PDBsum3bwv
PubMed
UniProtQ8CTG7|53DR_STAES Putative 5'(3')-deoxyribonucleotidase (Gene Name=SE_0505)

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