Structure of PDB 3bpc Chain B

Receptor sequence

>3bpcB (length=214) Species: 10090 (Mus musculus) [Search protein sequence]

EVKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGF
IRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCAR
DHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPSMVTLGCLVKGYFPE
PVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVA
HPASSTKVDKKIVP

3D structure

PDB

3bpc Exploration of specificity in germline monoclonal antibody recognition of a range of natural and synthetic epitopes.

Chain

Resolution

1.85 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	KDA	B	Y33 R52 N52D E100A	Y33 R52 N56 E107	PDBbind-CN: -logKd/Ki=4.80,Kd=16uM

External links

PDB	RCSB:3bpc, PDBe:3bpc, PDBj:3bpc
PDBsum	3bpc
PubMed	18272175

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