Structure of PDB 3afo Chain B

Receptor sequence
>3afoB (length=341) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
VKIKPVNNLRSSSSADFVSPPNSKLQSLIWQNPLQNVYITKKPWTPSTRE
AMVEFITHLHESYPEVNVIVQPDVAEEISQDFKSPLENDPNRPHILYTGP
EQDIVNRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFALGTLGFLSPFD
FKEHKKVFQEVISSRAKCLHRTRLECHLKKKDSNSSIVTHAMNDIFLHRG
NSPHLTNLDIFIDGEFLTRTTADGVALATPTGSTAYSLSAGGSIVSPLVP
AILMTPICPRSLSFRPLILPHSSHIRIKIGSSVVKLSVDGIPQQDLDVGD
EIYVINEVKRSGIYCVAKTENDWIRGINELLGFNSSFRLTK
3D structure
PDB3afo The structural factor conferring NADH kinase activity on yeast mitochondrial Pos5
ChainB
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.1.86: NADH kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAI B D150 G151 L154 F178 N226 D227 T267 A268 Y269 S272 D330 G331 D117 G118 L121 F145 N193 D194 T234 A235 Y236 S239 D289 G290
Gene Ontology
Molecular Function
GO:0003951 NAD+ kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016773 phosphotransferase activity, alcohol group as acceptor
GO:0042736 NADH kinase activity
Biological Process
GO:0006741 NADP biosynthetic process
GO:0016226 iron-sulfur cluster assembly
GO:0016310 phosphorylation
GO:0019674 NAD metabolic process
GO:0034599 cellular response to oxidative stress
Cellular Component
GO:0005739 mitochondrion
GO:0005759 mitochondrial matrix

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3afo, PDBe:3afo, PDBj:3afo
PDBsum3afo
PubMed
UniProtQ06892|POS5_YEAST NADH kinase POS5, mitochondrial (Gene Name=POS5)

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