Structure of PDB 2zi0 Chain B
Receptor sequence
>2zi0B (length=55) Species:
12315
(Tomato aspermy virus) [
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IEIPLHEIIRKLERMNQKKQAQRKRHKLNRKERGHKSPSEQRRSELWHAR
QVELS
3D structure
PDB
2zi0
Structural basis for RNA-silencing suppression by Tomato aspermy virus protein 2b
Chain
B
Resolution
2.82 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
B
R26 K34 K39 R46 W50 H51
R23 K31 K36 R43 W47 H48
PDBbind-CN
: Kd=75nM
BS02
rna
B
R28 H29 N32 R33 R36 H38 S40 P41 S42 R46
R25 H26 N29 R30 R33 H35 S37 P38 S39 R43
PDBbind-CN
: Kd=75nM
External links
PDB
RCSB:2zi0
,
PDBe:2zi0
,
PDBj:2zi0
PDBsum
2zi0
PubMed
18600235
UniProt
Q8UYT3
|2B_TAV Suppressor of silencing 2b (Gene Name=ORF2b)
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