Structure of PDB 2zgw Chain B

Receptor sequence
>2zgwB (length=234) Species: 70601 (Pyrococcus horikoshii OT3) [Search protein sequence]
MLGLKTSIIGRRVIYFQEITSTNEFAKTSYLEEGTVIVADKQTMGHGALN
KWESPEGGLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSIDGRIKW
PNDVLVNYKAIAGVLVEGKGDKIVLGIGLNVNNKVPNGATSMKLELGSEV
PLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGDGSFE
GIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRFL
3D structure
PDB2zgw Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate
ChainB
Resolution1.5 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) A48 A111 R233
Catalytic site (residue number reindexed from 1) A48 A110 R232
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADN B W53 E54 N131 P137 W52 E53 N130 P136
BS02 BTN B S21 T22 Q42 H46 G47 A48 W53 L62 N103 G114 V115 I128 G129 S21 T22 Q42 H46 G47 A48 W52 L61 N102 G113 V114 I127 G128
Gene Ontology
Molecular Function
GO:0004077 biotin--[biotin carboxyl-carrier protein] ligase activity
GO:0005524 ATP binding
GO:0016874 ligase activity
GO:0046872 metal ion binding
Biological Process
GO:0036211 protein modification process
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:2zgw, PDBe:2zgw, PDBj:2zgw
PDBsum2zgw
PubMed18372281
UniProtO57883

[Back to BioLiP]