Structure of PDB 2zag Chain B

Receptor sequence
>2zagB (length=477) Species: 186497 (Pyrococcus furiosus DSM 3638) [Search protein sequence]
TSGWEDALKWLRENTPEYSTATSWWDYGYWIESSLLGQRRASADGGHARD
RDHILALFLARDGNISEVDFESWELNYFLVYLNDWAKFNAISYLGGAITR
REYNGDESGRGAVTTLLPLPRYGEKYVNLYAKVIVDVSNSSVKVTVGDRE
CDPLMVTFTPSGKTIKGTGTCSDGNAFPYVLHLTPTIGVLAYYKVATANF
IKLAFGVPASTIPGFSDKLFSNFEPVYESGNVIVYRFTPFGIYKIEENIN
GTWKQVYNLTPGKHELKLYISAFGRDIENATLYIYAINNEKIIEKIKIAE
ISHMDYLNEYPIAVNVTLPNATSYRFVLVQKGPIGVLLDAPKVNGEIRSP
TNILREGESGEIELKVGVDKDYTADLYLRATFIYLVRKSGKDNEDYDAAF
EPQMDVFFITKIGENIQLKEGENTVKVRAELPEGVISSYKDELQRKYGDK
LIIRGIRVEPVFIAEKEYLMLEVSASA
3D structure
PDB2zag Structure-guided identification of a new catalytic motif of oligosaccharyltransferase
ChainB
Resolution3.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.4.99.21: dolichyl-phosphooligosaccharide-protein glycotransferase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA B E554 A759 Y793 E796 E67 A272 Y306 E309
Gene Ontology
Molecular Function
GO:0004576 oligosaccharyl transferase activity
Biological Process
GO:0006486 protein glycosylation
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:2zag, PDBe:2zag, PDBj:2zag
PDBsum2zag
PubMed18046457
UniProtQ8U4D2|AGLB1_PYRFU Dolichyl-phosphooligosaccharide-protein glycotransferase 1 (Gene Name=aglB1)

[Back to BioLiP]