Structure of PDB 2z8f Chain B

Receptor sequence
>2z8fB (length=399) Species: 216816 (Bifidobacterium longum) [Search protein sequence]
TDDGGVVNITYMHRLPDSEGMTLVNDIVAKWNKQHPDIQVKATKFDGKAS
DMIKKLETDVKSGEAPDLAQVGYAELPEVFTKGLLQDVTQYAEQYKNDFA
SGPYSLVQVGGKAYGLPQDTGPLVYFYNKAEFEKLGITEIPQTADEFIAA
AKTAAAAGKYIMSYQPDEAGNMISGLAGASGGWYKVKGDSWVVNTETDGS
KATADFYQQLLDAKAATTNPRWDPSFDASIKDGSLIGTVAAAWEAPLFMT
SSGGTGSGEWQVAQLGDWFGNAGKTGPDGGSAVAVLKNSKHPKEAMEFLD
WFNTQVPDLVSQGLVPAATTEDAETPSEWSTFFGGQDIMKEFKTANNNMG
DFTYMPGFSAVAAKMNETAAKATGKVADIFSDAQTTSVDTLKNFGLSVS
3D structure
PDB2z8f Structural and thermodynamic analyses of solute-binding Protein from Bifidobacterium longum specific for core 1 disaccharide and lacto-N-biose I.
ChainB
Resolution1.65 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC B S85 A398 N401 S50 A363 N366
BS02 GAL B A84 S85 W257 A49 S50 W222
BS03 GAL B P51 D154 W278 G314 G315 S316 P16 D119 W243 G279 G280 S281
BS04 ZN B D38 H326 E329 D3 H291 E294
BS05 ZN B H70 D72 H35 D37
BS06 ZN B D357 E359 D322 E324
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:2z8f, PDBe:2z8f, PDBj:2z8f
PDBsum2z8f
PubMed18332142
UniProtA8W790

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