Structure of PDB 2z4r Chain B

Receptor sequence
>2z4rB (length=240) Species: 2336 (Thermotoga maritima) [Search protein sequence]
TPLNPDYTFENFVVGPGNSFAYHAALEVAKHPGRYNPLFIYGGVGLGKTH
LLQSIGNYVVQNEPDLRVMYITSEKFLNDLVDSMKEGKLNEFREKYRKKV
DILLIDDVQFLIGKTGVQTELFHTFNELHDSGKQIVICSDREPQKLSEFQ
DRLVSRFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENV
DDNLRRLRGAIIKLLVYKETTGKEVDLKEAILLLKDFIKP
3D structure
PDB2z4r A Common Mechanism for the ATP-DnaA-dependent Formation of Open Complexes at the Replication Origin
ChainB
Resolution3.05 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MG B T144 D202 T49 D107
BS02 ADP B Y102 F107 V108 V139 G140 L141 G142 K143 T144 H145 I271 L299 R300 Y7 F12 V13 V44 G45 L46 G47 K48 T49 H50 I176 L204 R205
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003688 DNA replication origin binding
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006260 DNA replication
GO:0006270 DNA replication initiation
GO:0006275 regulation of DNA replication
Cellular Component
GO:0005737 cytoplasm
GO:0005886 plasma membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:2z4r, PDBe:2z4r, PDBj:2z4r
PDBsum2z4r
PubMed18216012
UniProtP46798|DNAA_THEMA Chromosomal replication initiator protein DnaA (Gene Name=dnaA)

[Back to BioLiP]