Structure of PDB 2wg9 Chain B

Receptor sequence
>2wg9B (length=114) Species: 4530 (Oryza sativa) [Search protein sequence]
AKDQGCSRTCESQFCTIAPLLRYGKYCGILYSGCPGERPCDALDACCMVH
DHCVDTHNDDYLNTMCNENLLSCIDRVSGATFPGNKCNVGQTASVIRGVI
ETAVFAGKILHKRD
3D structure
PDB2wg9 Crystal Structure of a Class Xib Phospholipase A2 (Pla2): Rice (Oryza Sativa) Isoform-2 Pla2 and an Octanoate Complex.
ChainB
Resolution2.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.1.1.4: phospholipase A2.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B Y37 G39 Y42 D62 Y26 G28 Y31 D51
BS02 OCA B A29 G39 C58 H61 D62 A18 G28 C47 H50 D51
Gene Ontology
Molecular Function
GO:0004623 phospholipase A2 activity
GO:0005509 calcium ion binding
Biological Process
GO:0006644 phospholipid metabolic process
GO:0016042 lipid catabolic process
GO:0050482 arachidonate secretion

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:2wg9, PDBe:2wg9, PDBj:2wg9
PDBsum2wg9
PubMed19457861
UniProtQ9XG81|PLA22_ORYSJ Probable phospholipase A2 homolog 2 (Gene Name=PLA2-II)

[Back to BioLiP]