Structure of PDB 2vhg Chain B

Receptor sequence
>2vhgB (length=127) Species: 210 (Helicobacter pylori) [Search protein sequence]
LYKSNHNVVYSCKYHIVWCPKYRRKVLVGAVEMRLKEIIQEVAKELRVEI
IEMQTDKDHIHILADIDPSFGVMKFIKTAKGRSSRILRQEFNHLKTKLPT
LWTNSCFISTVGGAPLNVVKQYIENQQ
3D structure
PDB2vhg Mechanism of is200/is605 Family DNA Transposases: Activation and Transposon-Directed Target Site Selection.
ChainB
Resolution2.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B N10 L51 R52 D72 S74 F75 N5 L46 R47 D67 S69 F70
BS02 dna B M78 K82 T83 K85 G86 R87 S89 R90 R93 T105 W107 M73 K77 T78 K80 G81 R82 S84 R85 R88 T100 W102
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004803 transposase activity
GO:0046872 metal ion binding
Biological Process
GO:0006313 DNA transposition

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:2vhg, PDBe:2vhg, PDBj:2vhg
PDBsum2vhg
PubMed18243097
UniProtQ933Z0

[Back to BioLiP]