Structure of PDB 2rfm Chain B

Receptor sequence
>2rfmB (length=184) Species: 50339 (Thermoplasma volcanium) [Search protein sequence]
EIVEKIKDEKSINQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENF
DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWS
IIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGA
DISARDLTGLTAEASARIFGRQEVIKIFTEVRRA
3D structure
PDB2rfm Structural insights into an equilibrium folding intermediate of an archaeal ankyrin repeat protein
ChainB
Resolution1.65 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BU2 B R176 Q177 E178 V179 R171 Q172 E173 V174
BS02 BU2 B N26 Y27 R28 T34 K57 N21 Y22 R23 T29 K52
Gene Ontology
Molecular Function
GO:0000976 transcription cis-regulatory region binding
Biological Process
GO:0045944 positive regulation of transcription by RNA polymerase II

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Molecular Function
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Biological Process
External links
PDB RCSB:2rfm, PDBe:2rfm, PDBj:2rfm
PDBsum2rfm
PubMed18305166
UniProtQ978J0|Y1425_THEVO Putative ankyrin repeat protein TV1425 (Gene Name=TV1425)

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