Structure of PDB 2r1y Chain B

Receptor sequence
>2r1yB (length=216) Species: 10090 (Mus musculus) [Search protein sequence]
EVKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGF
IRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCAR
DHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPNSMVTLGCLVKGYFP
EPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNV
AHPASSTKVDKKIVPR
3D structure
PDB2r1y Exploration of specificity in germline monoclonal antibody recognition of a range of natural and synthetic epitopes.
ChainB
Resolution1.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 KDR B Y33 N52D Y33 N56
BS02 KDO B Y33 R52 E100A Y33 R52 E107 PDBbind-CN: -logKd/Ki=4.51,Kd=31uM
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0002250 adaptive immune response
Cellular Component
GO:0019814 immunoglobulin complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:2r1y, PDBe:2r1y, PDBj:2r1y
PDBsum2r1y
PubMed18272175
UniProtA2NU21

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