Structure of PDB 2pms Chain B

Receptor sequence
>2pmsB (length=331) Species: 9606 (Homo sapiens) [Search protein sequence]
RRRSVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAE
NRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVVKKG
GSFQLNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVAR
FFSASCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLRD
GAGDVAFIRESTVFEDLSDEAERDEYELLCPDNTRKPVDKFKDCHLARVP
SHAVVARSVNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFK
DSAIGFSRVPPRIDSGLYLGSGYFTAIQNLR
3D structure
PDB2pms Structure of a Complex of Human Lactoferrin N-lobe with Pneumococcal Surface Protein A Provides Insight into Microbial Defense Mechanism.
ChainB
Resolution2.91 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CO3 B D61 T118 R122 T123 A124 Y193 D59 T116 R120 T121 A122 Y191
BS02 FE B D61 Y93 Y193 H254 D59 Y91 Y191 H252
Gene Ontology
Cellular Component
GO:0005576 extracellular region

View graph for
Cellular Component
External links
PDB RCSB:2pms, PDBe:2pms, PDBj:2pms
PDBsum2pms
PubMed17543335
UniProtP02788|TRFL_HUMAN Lactotransferrin (Gene Name=LTF)

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