Structure of PDB 2owq Chain B

Receptor sequence
>2owqB (length=224) Species: 696871 (Vaccinia virus Western Reserve) [Search protein sequence]
SGLVPRGSHMNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDE
TSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKE
IASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKIS
KLLLQHITKHVSVLYCLGKTDFSNIRAKLESVTTIVGYHPAARDFEKDRS
FEIINVLLELDNKAPINWAQGFIY
3D structure
PDB2owq Crystal structure of vaccinia virus uracil-DNA glycosylase reveals dimeric assembly
ChainB
Resolution2.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.2.27: uracil-DNA glycosylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GOL B G66 D68 Y70 P78 F79 N120 G75 D77 Y79 P87 F88 N129
BS02 GOL B T12 T14 F50 I51 T21 T23 F59 I60
BS03 GOL B K160 Y180 H181 K169 Y188 H189
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004844 uracil DNA N-glycosylase activity
GO:0016787 hydrolase activity
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds
Biological Process
GO:0006281 DNA repair

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:2owq, PDBe:2owq, PDBj:2owq
PDBsum2owq
PubMed17605817
UniProtP04303|UNG_VACCW Uracil-DNA glycosylase (Gene Name=OPG116)

[Back to BioLiP]