Structure of PDB 2okx Chain B

Receptor sequence
>2okxB (length=954) Species: 84635 (Bacillus sp. GL1) [Search protein sequence]
GRNWNASWIWGGQEESPRNEWRCFRGSFDAPASVEGPAMLHITADSRYVL
FVNGEQVGRGPVRSWPKEQFYDSYDIGGQLRPGVRNTIAVLVLHFGVSNF
YYLRGRGGLIAEIEADGRTLAATDAAWRTERLGGQRSNSPRMACQQGFGE
VIDARELAEDWALPAFDDGGWAQARSIGPAGTAPWTSLVPRDIPFLTEEK
LYPASIQSLSRVKAPKYAAALDLRNQMVPESVNHANPVSYCGYVATILTL
ETSGVVTLGFPTGVRGSGVWVDGVLQTEWTGVQPERYYSLNLAAGEHLVL
VDITSSDHGGSSHFAIDSEAAFTLRSPAGDNGVPLATIGTFDQSEYIDHR
PGRRMQTDHPDYRALPEAAPTAAALEAFASWVKPFEPSLYTEENVFGSNV
WRTLAERRAVPRSVLNAILPVPEPGVLPVFEDGDCELVIDLGAERSGFIG
FELEAPAGTIIDAYGVEYMREGYTQHTYGLDNTFRYICREGRQSYVSPVR
RGFRYLFLTVRGNSAPVKLHEIYIRQSTYPVAEQGSFRCSDALLNATWEI
SRHTTRLCMEDTFVDCPSYEQVFWVGDSRNEALVNYYVFGETEIVERCLN
LVPGSADETPLYLDQVPSAWSSVIPNWTFFWILACREYAAHTGNEAFAAR
IWPAVKHTLTHYLEHIDDSGLLNMAGWNLLDWAPIDQPNEGIVTHQNLFL
VKALRDSRALAAAAGATEEADAFAARADLLAETINAVLWDEEKRAYIDCI
HADGRRSDVYSMQTQVVAYLCGVAQGEREAVIEGYLSSPPPAFVQIGSPF
MSFFYYEALEKAGRQTLMLDDIRRNYGQMLRYDATTCWEMYPNFAENRSN
PDMLTRSHCHAWSAAPGYFLGSSILGVKRGADGWRTVDIAPQPCDLTWAE
GVVPLPQGGHIAVSWEFVSAGKLKLRIEAPEDIEVNVTLPEGIEGEVTQV
KYMS
3D structure
PDB2okx Crystal Structure of Glycoside Hydrolase Family 78 alpha-L-Rhamnosidase from Bacillus sp. GL1
ChainB
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.40: alpha-L-rhamnosidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA B V423 H522 V421 H520
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0016787 hydrolase activity
GO:0030596 alpha-L-rhamnosidase activity
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function

View graph for
Biological Process
External links
PDB RCSB:2okx, PDBe:2okx, PDBj:2okx
PDBsum2okx
PubMed17936784
UniProtQ93RE7

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