Structure of PDB 2ogn Chain B

Receptor sequence
>2ognB (length=205) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
MKGILGTKIGMTQIWKNDRAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIG
YAPKAERKVNKPMQGHFAKAGVAPTRILREFRGFAPDGDSVNVDIFAEGE
KIDATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRV
YKGKRMAGHMGMERVTVQNLEVVEIRAGENLILVKGAIPGANGGLVVLRS
AAKAS
3D structure
PDB2ogn Induced-fit tightens pleuromutilins binding to ribosomes and remote interactions enable their selectivity.
ChainB
Resolution3.56 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B M11 K61 G65 G110 Q114 G115 A123 G139 S140 G142 Q143 R144 G148 G153 P189 M11 K61 G65 G110 Q114 G115 A123 G139 S140 G142 Q143 R144 G148 G153 P189 PDBbind-CN: Kd=7.5nM
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2ogn, PDBe:2ogn, PDBj:2ogn
PDBsum2ogn
PubMed17360517
UniProtQ9RXK2|RL3_DEIRA Large ribosomal subunit protein uL3 (Gene Name=rplC)

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