Structure of PDB 2ogi Chain B

Receptor sequence
>2ogiB (length=194) Species: 216466 (Streptococcus agalactiae serogroup V) [Search protein sequence]
MTYKDYTGLDRTELLSKVRHMMSDKRFNHVLGVERAAIELAERYGYDKEK
AGLAALLHDYAKELSDDEFLRLIDKYQPDPDLKKWGNNIWHGLVGIYKIQ
EDLAIKDQDILAAIAKHTVGSAQMSTLDKIVYVADYIEHNRDFPGVEEAR
ELAKVDLNKAVAYETARTVAFLASKAQPIYPKTIETYNAYIPYL
3D structure
PDB2ogi Crystal structure of conserved hypothetical protein TIGR00488 (NP_688652.1) from Streptococcus agalactiae 2603 at 1.85 A resolution
ChainB
Resolution1.85 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.1.41: bis(5'-nucleosyl)-tetraphosphatase (symmetrical).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE B H29 H58 D59 D135 H29 H58 D59 D135
BS02 FE B D59 H91 H117 D59 H91 H117
BS03 GDP B H29 D59 K62 N88 H91 H117 T118 D135 R141 L172 P178 Y180 T183 H29 D59 K62 N88 H91 H117 T118 D135 R141 L172 P178 Y180 T183
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016787 hydrolase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:2ogi, PDBe:2ogi, PDBj:2ogi
PDBsum2ogi
PubMed
UniProtQ8DY32|AP4AH_STRA5 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (Gene Name=SAG1661)

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