Structure of PDB 2lup Chain B

Receptor sequence
>2lupB (length=90) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
GSLDMNAKRQLYSLIGYASLRLHYVTVKKPTAVDPNSIVECRVGDGTVLG
TGVGRNIKIAGIRAAENALRDKKMLDFYAKQRAAIPRSES
3D structure
PDB2lup Structure of a yeast RNase III dsRBD complex with a noncanonical RNA substrate provides new insights into binding specificity of dsRBDs.
ChainB
ResolutionN/A
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.26.3: ribonuclease III.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B K371 R372 Y375 S376 P393 A395 N419 K8 R9 Y12 S13 P30 A32 N56 PDBbind-CN: Kd=34.1uM
Gene Ontology
Molecular Function
GO:0003725 double-stranded RNA binding
Biological Process
GO:0006364 rRNA processing

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Molecular Function
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Biological Process
External links
PDB RCSB:2lup, PDBe:2lup, PDBj:2lup
PDBsum2lup
PubMed21742266
UniProtQ02555|RNT1_YEAST Ribonuclease 3 (Gene Name=RNT1)

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