Structure of PDB 2ji5 Chain B

Receptor sequence
>2ji5B (length=212) Species: 2261 (Pyrococcus furiosus) [Search protein sequence]
HMRIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSEDHEVAVVVGGGKLAR
KYIEVAEKFNSSETFKDFIGIQITRANAMLLIAALREKAYPVVVEDFWEA
WKAVQLKKIPVMGGTHPGHTTDAVAALLAEFLKADLLVVITNVDGVYTAD
TAKKIKKMKPEELLEIVGSVIDPLAAKIIARTGIKTIVIGKEDAKDLFRV
IKGDHNGTTIEP
3D structure
PDB2ji5 The Structure of Ump Kinase from Pyrococcus Furiosus Complexed with Utp
ChainB
Resolution2.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.4.22: UMP kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 UTP B G43 G44 R49 D66 G69 I70 G113 T114 H115 H118 T119 T120 G44 G45 R50 D67 G70 I71 G114 T115 H116 H119 T120 T121
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0009041 UMP/dUMP kinase activity
GO:0016301 kinase activity
GO:0033862 UMP kinase activity
GO:0046872 metal ion binding
Biological Process
GO:0006221 pyrimidine nucleotide biosynthetic process
GO:0006225 UDP biosynthetic process
GO:0016310 phosphorylation
GO:0044210 'de novo' CTP biosynthetic process
GO:0046940 nucleoside monophosphate phosphorylation
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Cellular Component
External links
PDB RCSB:2ji5, PDBe:2ji5, PDBj:2ji5
PDBsum2ji5
PubMed
UniProtQ8U122|PYRH_PYRFU Uridylate kinase (Gene Name=pyrH)

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