Structure of PDB 2jgd Chain B

Receptor sequence
>2jgdB (length=807) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
TNVKQVKVLQLINAYRFRGHQHANLDPLGLWKVADLDPSFHDLTEADFQE
TFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQR
IESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPRFSLEGGDALIPMLK
EMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHGTGD
VKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEP
SSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQYCT
DIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHY
QKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWR
PMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRV
AKIYADRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF
HRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSSEEAVLAFEYGYATAEP
RTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQG
PEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVM
SPKSLLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYY
DLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEP
LNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGYMSVHQKQQQDLV
NDALNVE
3D structure
PDB2jgd Crystal Structure of the E1 Component of the Escherichia Coli 2-Oxoglutarate Dehydrogenase Multienzyme Complex.
ChainB
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.2.4.2: oxoglutarate dehydrogenase (succinyl-transferring).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AMP B S302 H313 R337 W533 T673 R710 M711 S208 H219 R243 W409 T547 R584 M585
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0000287 magnesium ion binding
GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0005515 protein binding
GO:0016491 oxidoreductase activity
GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0030976 thiamine pyrophosphate binding
GO:0042802 identical protein binding
Biological Process
GO:0006099 tricarboxylic acid cycle
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0045252 oxoglutarate dehydrogenase complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2jgd, PDBe:2jgd, PDBj:2jgd
PDBsum2jgd
PubMed17367808
UniProtP0AFG3|ODO1_ECOLI 2-oxoglutarate dehydrogenase E1 component (Gene Name=sucA)

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