Structure of PDB 2jdy Chain B

Receptor sequence
>2jdyB (length=114) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence]
ATQGVFTLPANTRFGVTAFANSSNTQTVNVLVNNETAATFSGQSTNNAVI
GTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDN
DYNDAVVVINWPLG
3D structure
PDB2jdy Engineering of Pa-Iil Lectin from Pseudomonas Aeruginosa - Unravelling the Role of the Specificity Loop for Sugar Preference.
ChainB
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MMA B S22 S23 N24 D96 D99 D101 D104 S22 S23 N24 D96 D99 D101 D104 MOAD: Kd=42.9uM
BS02 CA B E95 D99 D101 D104 E95 D99 D101 D104
BS03 CA B N21 D101 N103 D104 N21 D101 N103 D104
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
Biological Process
GO:0044010 single-species biofilm formation

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:2jdy, PDBe:2jdy, PDBj:2jdy
PDBsum2jdy
PubMed17540045
UniProtQ9HYN5

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