Structure of PDB 2ive Chain B

Receptor sequence
>2iveB (length=450) Species: 34 (Myxococcus xanthus) [Search protein sequence]
MNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVE
QGPNSFLDREPATRALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPAS
PPAFLASDILPLGARLRVAGELFSRRAPEGVDESLAAFGRRHLGHRATQV
LLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQA
PKLSGALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGGWRLIIE
EHGRRAELSVAQVVLAAPAHATAKLLRPLDDALAALVAGIAYAPIAVVHL
GFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMV
GGARQPGLVEQDEDALAALAREELKALAGVTARPSFTRVFRWPLGIPQYN
LGHLERVAAIDAALQRLPGLHLIGNAYKGVGLNDCIRNAAQLADALVAGN
3D structure
PDB2ive Crystal Structure of Protoporphyrinogen Oxidase from Myxococcus Xanthus and its Complex with the Inhibitor Acifluorfen.
ChainB
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.3.3.4: protoporphyrinogen oxidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD B V15 G16 G18 I19 S20 E39 S40 G46 G61 P62 S64 V251 A283 P284 A287 N441 G447 L448 V6 G7 G9 I10 S11 E30 S31 G37 G52 P53 S55 V235 A267 P268 A271 N425 G431 L432
BS02 TWN B T166 G167 I168 F329 G330 F331 L332 M365 T157 G158 I159 F313 G314 F315 L316 M349
Gene Ontology
Molecular Function
GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity
GO:0016491 oxidoreductase activity
Biological Process
GO:0006779 porphyrin-containing compound biosynthetic process
GO:0006782 protoporphyrinogen IX biosynthetic process
GO:0006783 heme biosynthetic process
Cellular Component
GO:0005737 cytoplasm
GO:0005886 plasma membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2ive, PDBe:2ive, PDBj:2ive
PDBsum2ive
PubMed17046834
UniProtP56601|PGOX_MYXXA Protoporphyrinogen oxidase (Gene Name=pgoX)

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