Structure of PDB 2fmy Chain B

Receptor sequence
>2fmyB (length=218) Species: 129958 (Carboxydothermus hydrogenoformans) [Search protein sequence]
ATQMRLTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFL
VKSGRVRVYLAYEDKEFTLAILEAGDIFCTHTRAFIQAMEDTTILYTDIR
NFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQA
AMDTGLKVPQGIKLELGLNTEEIALMLGTTRQTVSVLLNDFKKMGILERV
NQRTLLLKDLQKLKEFSS
3D structure
PDB2fmy Crystal Structure of CO-sensing Transcription Activator CooA Bound to Exogenous Ligand Imidazole
ChainB
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEM B Q1004 M1005 L1007 K1126 K1194 Q3 M4 L6 K125 K193
BS02 IMD B M1005 V1118 M4 V117
BS03 HEM B F1079 C1080 H1082 T1083 R1084 I1100 Q1104 M1117 F78 C79 H81 T82 R83 I99 Q103 M116
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:2fmy, PDBe:2fmy, PDBj:2fmy
PDBsum2fmy
PubMed17292914
UniProtQ3AB29

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