Structure of PDB 2fdc Chain B

Receptor sequence
>2fdcB (length=585) Species: 1395 ([Bacillus] caldotenax) [Search protein sequence]
VEGRFQLVAPYEPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTIS
NVIAQVNKPTLVIAHNKTLAGQLYSELKEFFPHNAVEYFVSYYDYYQPEA
YVPQTDTYIEKDAKINDEIDKLRHSATSALFERRDVIIVASVSCIYGLGS
PEEYRELVVSLRVGMEIERNALLRRLVDIQYDRNDIDFRRGTFRVRGDVV
EIFPASRDEHCIRVEFFGDEIERIREVDALTGEVLGEREHVAIFPASHFV
TREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLALRPPGSTPYTLLDYFPDDFLIIVDESHVTLPQLRGM
YNGDRARKQVLVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYE
LEHSPGVVEQIIRPTGLLDPTIDVRPTKGQIDDLIGEIRERVERNERTLV
TTLTKKMAEDLTDYLKEAGIKVAYLHIEIIRDLRLGKYDVLVGINLLREG
LDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNANGHVIMYADTITK
SMEIAIQETKRRRAIQEEYNRKHGIVPRTVKKEIR
3D structure
PDB2fdc Structural basis for DNA recognition and processing by UvrB.
ChainB
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B N66 K67 S91 Y92 Y93 Y96 Q97 P98 I109 K111 I115 S141 S143 Y146 F249 S304 I306 E307 M350 N352 F527 N66 K67 S91 Y92 Y93 Y96 Q97 P98 I109 K111 I115 S141 S143 Y146 F249 S304 I306 E307 M350 N352 F519
BS02 FLQ B H65 P345 Q346 H65 P345 Q346
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0006289 nucleotide-excision repair
Cellular Component
GO:0009380 excinuclease repair complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2fdc, PDBe:2fdc, PDBj:2fdc
PDBsum2fdc
PubMed16532007
UniProtP56981|UVRB_BACCA UvrABC system protein B (Gene Name=uvrB)

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