Structure of PDB 2eab Chain B

Receptor sequence
>2eabB (length=881) Species: 1681 (Bifidobacterium bifidum) [Search protein sequence]
GDGDTSKDDWLWYKQPASQTDATATAGGNYGNPDNNRWQQTTLPFGNGKI
GGTVWGEVSRERVTFNEETLWTGGPGSSTSYNGGNNETKGQNGATLRALN
KQLANGAETVNPGNLTGGENAAEQGNYLNWGDIYLDYGFNDTTVTEYRRD
LNLSKGKADVTFKHDGVTYTREYFASNPDNVMVARLTASKAGKLNFNVSM
PTNTNYSKTGETTTVKGDTLTVKGALGNNGLLYNSQIKVVLDGTLSEGSD
GASLKVSDAKAVTLYIAAATDYKQKYPSYRTGETAAEVNTRVAKVVQDAA
NKGYTAVKKAHIDDHSAIYDRVKIDLGQSGHSSDGAVATDALLKAYQRGS
ATTAQKRELETLVYKYGRYLTIGSSRENSQLPSNLQGIWSVTAGDNAHGN
TPWGSDFHMNVNLQMNYWPTYSANMGELAEPLIEYVEGLVKPGRVTAKVY
AGAETTNPETTPIGEGEGYMAHTENTAYGWTAPGQSFSWGWSPAAVPWIL
QNVYEAYEYSGDPALLDRVYALLKEESHFYVNYMLHKAGSSSGDRLTTGV
AYSPEQGPLGTDGNTYESSLVWQMLNDAIEAAKAKGDPDGLVGNTTDCSA
DNWAKNDSGNFTDANANRSWSCAKSLLKPIEVGDSGQIKEWYFEGALGKK
KDGSTISGYQADNQHRHMSHLLGLFPGDLITIDNSEYMDAAKTSLRYRCF
KGNVLQSNTGWAIGQRINSWARTGDGNTTYQLVELQLKNAMYANLFDYHA
PFQIDGNFGNTSGVDEMLLQSNSTFTDTAGKKYVNYTNILPALPDAWAGG
SVSGLVARGNFTVGTTWKNGKATEVRLTSNKGKQAAVKITAGGAQNYEVK
NVNAKVVTNADGASLLVFDTTAGTTYTITKK
3D structure
PDB2eab Structural basis on the catalytic reaction mechanism of novel 1,2-alpha-L-fucosidase (AFCA) from Bifidobacterium bifidum
ChainB
Resolution1.12 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.63: 1,2-alpha-L-fucosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B G56 E76 S385 S390 L392 P393 G48 E68 S374 S379 L381 P382
Gene Ontology
Molecular Function
GO:0004560 alpha-L-fucosidase activity
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:2eab, PDBe:2eab, PDBj:2eab
PDBsum2eab
PubMed17459873
UniProtQ6JV24

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