Structure of PDB 2d5w Chain B

Receptor sequence
>2d5wB (length=602) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
MGPQDNSLVIGASQEPRVLAGDFLRVISNQAIKSEIEQYLFAPFIGFNAD
SQNFPVLATEVPTLENGRLRVTDIGGGKKRLEMDITIRPDAKWSDGRPIT
TEDVAFYFEVGKAKGMPVLNPDFWERVNVRIKDARNFTLIFEPAYYYDTY
GPINTYAPKHIMGPEWERVKAAARGLDPDKDAEKLNELYRNFFLKFATPQ
ALNRGAMVYSGPFKLKRWVPGNSIEMERNPNFPIKPEGGESKYVQKVVYR
FIQNTNSLLVAVIGGSIDATSSVSLTFDQGRSPQLVRRAPGRFDIWFVPG
AIWEHIDINKFENCQVVKDLGLNDKRTRQAILHALNREGLVKAFFDGLQP
VAHTWIAPVNPLFNPNVKKYEFDLKKAEALLAEMGWRKGPDGILQRTVNG
RTVRFEIEYVTTAGNVVRERTQQFFAEDLKKIGIAVKINNAPSAVVFADE
FIQRASECKWTGMFEFAWVSNLQEDGSLFQYKNLNTGAIMVPTKENNYQG
QNIGGWRNDEFDRLTSQAVLEFDPERRKQLFWRAQEIWAEELPALPLYFR
ANPYVVRKGLVNYVASAYSGGYGYPGWNAWEIGWESRGAVKKWDQAKYAL
ST
3D structure
PDB2d5w The crystal structure of oligopeptide binding protein from Thermus thermophilus HB8 complexed with pentapeptide
ChainB
Resolution1.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B Q14 N29 Q30 A31 S34 S272 R418 F447 F466 A467 W468 V469 Q501 N552 Y572 Y574 Q14 N29 Q30 A31 S34 S272 R418 F447 F466 A467 W468 V469 Q501 N552 Y572 Y574
Gene Ontology
Molecular Function
GO:1904680 peptide transmembrane transporter activity
Biological Process
GO:0015833 peptide transport
GO:0055085 transmembrane transport
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space
GO:0043190 ATP-binding cassette (ABC) transporter complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2d5w, PDBe:2d5w, PDBj:2d5w
PDBsum2d5w
PubMed
UniProtQ5SHU6

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