Structure of PDB 2d0w Chain B

Receptor sequence
>2d0wB (length=168) Species: 53399 (Hyphomicrobium denitrificans) [Search protein sequence]
AQEVFRNTVTGEALDVEGQAPKEGRDTPAVKQFMQTGVDPYVEVAGCLPK
GEEIYLESCSGCHGHIGEGKVGPGLNDSYWTYPKNTTDKGLFETIFGGAN
GMMGPHGQDLELDNMLKLIAWIRHIQKDDVADADWLSDEQKKNFKPFDIK
AWEATGKAAAEKAQCKIS
3D structure
PDB2d0w Crystal structures of cytochrome c(L) and methanol dehydrogenase from Hyphomicrobium denitrificans: structural and mechanistic insights into interactions between the two proteins
ChainB
Resolution1.98 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ZN B D77 Y79 D77 Y79
BS02 ZN B G64 H65 E68 G64 H65 E68
BS03 ZN B H106 D109 H106 D109
BS04 HEM B S58 C59 C62 H63 P73 L75 W80 T81 Y82 N85 T94 I95 N100 M103 S58 C59 C62 H63 P73 L75 W80 T81 Y82 N85 T94 I95 N100 M103
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0009055 electron transfer activity
GO:0020037 heme binding
Cellular Component
GO:0042597 periplasmic space

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:2d0w, PDBe:2d0w, PDBj:2d0w
PDBsum2d0w
PubMed16533029
UniProtQ4AE24

[Back to BioLiP]