Structure of PDB 2c50 Chain B

Receptor sequence
>2c50B (length=129) Species: 12022 (Escherichia phage MS2) [Search protein sequence]
ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQ
SSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSD
CELIVKAMQGLLKDGNPIPSAIAANSGIY
3D structure
PDB2c50 Structural basis of pyrimidine specificity in the MS2 RNA hairpin-coat-protein complex.
ChainB
Resolution2.65 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B T45 S47 R49 S51 S52 N55 K57 T59 K61 T45 S47 R49 S51 S52 N55 K57 T59 K61 PDBbind-CN: Kd=0.06nM
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005198 structural molecule activity
GO:0042802 identical protein binding
Biological Process
GO:0006417 regulation of translation
GO:1904972 negative regulation of viral translation
Cellular Component
GO:0019028 viral capsid
GO:0039617 T=3 icosahedral viral capsid

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2c50, PDBe:2c50, PDBj:2c50
PDBsum2c50
PubMed11720290
UniProtP03612|CAPSD_BPMS2 Capsid protein

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