Structure of PDB 2bmk Chain B

Receptor sequence
>2bmkB (length=223) Species: 10090 (Mus musculus) [Search protein sequence]
EVKLQESGGGLVQPGHSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGL
IRNKANGYTKEYSASVKGRFTISRDNSQSILYLQMNALRAEDSATYYCVR
DKGSYGNYEAWFAYWGQGTTVTVSSAKTTPPSVYPLAPGSQTNSMVTLGC
LVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS
ETVTCNVAHPASSTKVDKKIVPR
3D structure
PDB2bmk Structural basis for D-amino acid transamination by the pyridoxal 5'-phosphate-dependent catalytic antibody 15A9.
ChainB
Resolution2.3 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 PDD B Y33 R52 D95 K96 Y33 R52 D101 K102 MOAD: Kd=2.4uM
PDBbind-CN: -logKd/Ki=5.62,Kd=2.4uM
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