Structure of PDB 1z08 Chain B

Receptor sequence
>1z08B (length=158) Species: 9606 (Homo sapiens) [Search protein sequence]
AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGK
RVNLAIWDTAGQYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEI
CLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLD
LCKRMIET
3D structure
PDB1z08 Structural basis of family-wide Rab GTPase recognition by rabenosyn-5.
ChainB
Resolution1.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG B T33 T51 T17 T35
BS02 GNP B G28 G31 K32 T33 S34 F44 N45 D46 H48 T51 G77 N132 K133 D135 L136 S162 A163 K164 G12 G15 K16 T17 S18 F28 N29 D30 H32 T35 G61 N107 K108 D110 L111 S137 A138 K139
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding
Biological Process
GO:0032482 Rab protein signal transduction

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1z08, PDBe:1z08, PDBj:1z08
PDBsum1z08
PubMed16034420
UniProtQ9UL25|RAB21_HUMAN Ras-related protein Rab-21 (Gene Name=RAB21)

[Back to BioLiP]