Structure of PDB 1yty Chain B

Receptor sequence
>1ytyB (length=183) Species: 9606 (Homo sapiens) [Search protein sequence]
NEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFN
RLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKN
DVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFV
VFDSIESAKKFVETPGQKYKETDLLILFKDDYF
3D structure
PDB1yty Structural Basis for Recognition and Sequestration of UUU(OH) 3' Temini of Nascent RNA Polymerase III Transcripts by La, a Rheumatic Disease Autoantigen.
ChainB
Resolution2.29 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B Y23 Y24 D33 F35 K54 F55 N56 R57 L124 I140 Y17 Y18 D27 F29 K48 F49 N50 R51 L118 I134
BS02 rna B F28 R32 K105 V108 Q141 L146 K185 F22 R26 K99 V102 Q135 L140 K179
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Biological Process
GO:0006396 RNA processing
Cellular Component
GO:0005634 nucleus
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1yty, PDBe:1yty, PDBj:1yty
PDBsum1yty
PubMed16387655
UniProtP05455|LA_HUMAN Lupus La protein (Gene Name=SSB)

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