Structure of PDB 1yny Chain B

Receptor sequence
>1ynyB (length=459) Species: 301298 (Bacillus sp. AR9) [Search protein sequence]
KKWIRGGTVVTAADTYQADVLIEGERVVAIGHQLSVNGAEEIDATGCYVI
PGGIDPHTHLDMPFGGTVTADDFFTGTRAAAFGGTTSIVDFCLTKKGESL
KSAIATWHEKARGKAVIDYGFHLMIAEANDQVLEELESVISSEGITSLKV
FMAYKNVFQADDETLFKTLVKAKELGALVQVHAENGDVLDYLTKKALAEG
NTDPIYHAYTRPPEAEGEATGRAIALTALAGSQLYVVHVSCASAVQRIAE
AREKGWNVYGETCPQYLALDVSIMDQPDFEGAKYVWSPPLREKWNQEVLW
SALKNGILQTVGSDHCPFNFRGQKELGRGDFTKIPNGGPLIEDRLTILYS
EGVRQGRISLNQFVDISSTKAAKLFGMFPRKGTIAVGSDADIVIFDPHVK
RTLSVETHHMNVDYNPFEGMEVYGEVVSVLSRGSFVVRDKQFVGQAGSGQ
YIKRTTFEQ
3D structure
PDB1yny Molecular structure of D-hydantoinase from Bacillus sp. AR9: evidence for mercury inhibition.
ChainB
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.5.2.2: dihydropyrimidinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN B H58 H60 D315 H57 H59 D314
BS02 MN B H183 H239 H182 H238
Gene Ontology
Molecular Function
GO:0004157 dihydropyrimidinase activity
GO:0016787 hydrolase activity
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0046872 metal ion binding
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:1yny, PDBe:1yny, PDBj:1yny
PDBsum1yny
PubMed15733920
UniProtQ5DLU2

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