Structure of PDB 1vs0 Chain B

Receptor sequence
>1vs0B (length=305) Species: 83332 (Mycobacterium tuberculosis H37Rv) [Search protein sequence]
FEFDNLAPMLATHGTVAGLKASQWAFEGKWDGYRLLVEADHGAVRLRSRS
GRDVTAEYPQLRALAEDLADHHVVLDGEAVVLDSSGVPSFSQMQNRGRDT
RVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATSLTVPELLPGDGAQ
AFACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHWNTQEVVIGGWRAG
EGSSGVGSLLMGIPGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESP
FDVPLPARDAKGITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKPS
EVVRE
3D structure
PDB1vs0 Crystal Structure and Nonhomologous End-joining Function of the Ligase Component of Mycobacterium DNA Ligase D.
ChainB
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.5.1.1: DNA ligase (ATP).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B X481 D483 E613 X29 D31 E161
BS02 CL B L462 X481 L10 X29
BS03 CL B E727 R748 E273 R294
Gene Ontology
Molecular Function
GO:0003910 DNA ligase (ATP) activity
GO:0005524 ATP binding
Biological Process
GO:0006281 DNA repair
GO:0006310 DNA recombination

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Molecular Function
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Biological Process
External links
PDB RCSB:1vs0, PDBe:1vs0, PDBj:1vs0
PDBsum1vs0
PubMed16476729
UniProtP9WNV3|LIGD_MYCTU Multifunctional non-homologous end joining DNA repair protein LigD (Gene Name=ligD)

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