Structure of PDB 1vp4 Chain B

Receptor sequence
>1vp4B (length=416) Species: 243274 (Thermotoga maritima MSB8) [Search protein sequence]
HHHMVVNLEGKISKIGQNMKSSIIREILKFAADKDAISFGGGVPDPETFP
RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDE
DNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVV
VPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEK
RKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFS
KVLAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDL
LEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEG
FDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIK
RLREVVLEYGKEKHLL
3D structure
PDB1vp4 Crystal structure of Aminotransferase, putative (TM1131) from Thermotoga maritima at 1.82 A resolution
ChainB
Resolution1.82 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PLP B G105 S106 Q107 Y131 N187 D215 P217 Y218 T245 S247 K248 R255 G108 S109 Q110 Y134 N190 D218 P220 Y221 T248 S250 K251 R258
Gene Ontology
Molecular Function
GO:0008483 transaminase activity
GO:0030170 pyridoxal phosphate binding
Biological Process
GO:0009058 biosynthetic process
GO:1901605 alpha-amino acid metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1vp4, PDBe:1vp4, PDBj:1vp4
PDBsum1vp4
PubMed
UniProtQ9X0L5

[Back to BioLiP]