Structure of PDB 1vol Chain B

Receptor sequence
>1volB (length=187) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
VDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVI
MRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFK
DFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIV
LLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKI
3D structure
PDB1vol Crystal structure of a TFIIB-TBP-TATA-element ternary complex.
ChainB
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B V29 T31 F57 F74 K78 Q116 N117 F148 I152 R154 L163 T173 V18 T20 F46 F63 K67 Q105 N106 F137 I141 R143 L152 T162
BS02 dna B Q26 N27 R56 F57 R63 T70 L72 V119 S121 F148 P149 F165 S167 K169 V171 Q15 N16 R45 F46 R52 T59 L61 V108 S110 F137 P138 F154 S156 K158 V160
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
Biological Process
GO:0006352 DNA-templated transcription initiation
Cellular Component
GO:0005634 nucleus

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Cellular Component
External links
PDB RCSB:1vol, PDBe:1vol, PDBj:1vol
PDBsum1vol
PubMed7675079
UniProtP28147|TBP1_ARATH TATA-box-binding protein 1 (Gene Name=TBP1)

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