Structure of PDB 1vl0 Chain B

Receptor sequence
>1vl0B (length=280) Species: 272562 (Clostridium acetobutylicum ATCC 824) [Search protein sequence]
MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEK
KPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQIS
TDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAW
LYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN
YGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSV
LRNYMLELTTGDITREWKESLKEYIDLLQM
3D structure
PDB1vl0 Crystal structure of DTDP-4-dehydrorhamnose reductase, rfbD ortholog (CAC2315) from Clostridium acetobutylicum at 2.05 A resolution
ChainB
Resolution2.05 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.1.1.133: dTDP-4-dehydrorhamnose reductase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAI B G10 Q11 D31 V32 L35 I37 C58 A59 A60 T62 I99 T101 Y125 K129 T148 L151 G10 Q11 D31 V32 L35 I37 C58 A59 A60 T62 I99 T101 Y125 K129 T148 L151
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0008831 dTDP-4-dehydrorhamnose reductase activity
GO:0016491 oxidoreductase activity
Biological Process
GO:0019305 dTDP-rhamnose biosynthetic process
GO:0045226 extracellular polysaccharide biosynthetic process
Cellular Component
GO:0005829 cytosol

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Cellular Component
External links
PDB RCSB:1vl0, PDBe:1vl0, PDBj:1vl0
PDBsum1vl0
PubMed
UniProtQ97GQ1

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