Structure of PDB 1tjl Chain B

Receptor sequence
>1tjlB (length=145) Species: 562 (Escherichia coli) [Search protein sequence]
RKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVD
RTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKV
EDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG
3D structure
PDB1tjl Regulation through the secondary channel--structural framework for ppGpp-DksA synergism during transcription
ChainB
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B C114 C117 C135 C138 C108 C111 C129 C132
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
GO:0097216 guanosine tetraphosphate binding
Biological Process
GO:0006302 double-strand break repair
GO:0010468 regulation of gene expression
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1tjl, PDBe:1tjl, PDBj:1tjl
PDBsum1tjl
PubMed15294156
UniProtP0ABS1|DKSA_ECOLI RNA polymerase-binding transcription factor DksA (Gene Name=dksA)

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