Structure of PDB 1sv2 Chain B

Receptor sequence
>1sv2B (length=172) Species: 173 (Leptospira interrogans) [Search protein sequence]
SVRKILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHAEGVGLA
APQIGILKQIVVVGSEDNERYPGTPDVPERIILNPVITPLTKDTSGFWEG
CLSVPGMRGYVERPNQIRMQWMDEKGNQFDETIDGYKAIVYQHECDHLQG
ILYVDRLKDTKLFGFNETLDSS
3D structure
PDB1sv2 Novel conformational states of peptide deformylase from pathogenic bacterium Leptospira interrogans: implications for population shift
ChainB
Resolution3.0 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G48 Q53 C101 L102 H143 E144 H147
Catalytic site (residue number reindexed from 1) G48 Q53 C101 L102 H143 E144 H147
Enzyme Commision number 3.5.1.88: peptide deformylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B C101 H143 H147 C101 H143 H147
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0042586 peptide deformylase activity
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0043686 co-translational protein modification

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Molecular Function
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Biological Process
External links
PDB RCSB:1sv2, PDBe:1sv2, PDBj:1sv2
PDBsum1sv2
PubMed16239225
UniProtQ93LE9|DEF_LEPIN Peptide deformylase (Gene Name=def)

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