Structure of PDB 1r1z Chain B

Receptor sequence
>1r1zB (length=247) Species: 10116 (Rattus norvegicus) [Search protein sequence]
HHHHSSGLVPRGSHMAGTQAHRRFEYKYSFKGPHLVQSDGTVPFWAHAGN
AIPSADQIRIAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGADG
LAIWYTENQGLDGPVFGSADMWNGVGIFFDSFDNDGKKNNPAIVVVGNNG
QINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTP
DKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTE
3D structure
PDB1r1z The Crystal Structure of the Carbohydrate-recognition Domain of the Glycoprotein Sorting Receptor p58/ERGIC-53 Reveals an Unpredicted Metal-binding Site and Conformational Changes Associated with Calcium Ion Binding.
ChainB
Resolution2.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA B D160 F162 N164 D189 D130 F132 N134 D159
BS02 CA B D163 D165 N169 N170 D189 D133 D135 N139 N140 D159
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:1r1z, PDBe:1r1z, PDBj:1r1z
PDBsum1r1z
PubMed14643651
UniProtQ62902|LMAN1_RAT Protein ERGIC-53 (Gene Name=Lman1)

[Back to BioLiP]