Structure of PDB 1onk Chain B

Receptor sequence
>1onkB (length=263) Species: 3972 (Viscum album) [Search protein sequence]
DDVTCSASEPTVRIVGRNGMRVDVRDDDFHDGNQIQLWPSKSNNDPNQLW
TIKRDGTIRSNGSCLTTYGYTAGVYVMIFDCNTAVREATIWQIWDNGTII
NPRSNLVLAASSGIKGTTLTVQTLDYTLGQGWLAGNDTAPREVTIYGFRD
LCMESNGGSVWVETCDSSQKNQKWALYGDGSIRPKQNQDQCLTSGRDSVS
TVINIVSCSGASGSQRWVFTNEGAILNLKNGLAMDVAQANPKLRRIIIYP
ATGKPNQMWLPVF
3D structure
PDB1onk Mistletoe lectin I from viscum album
ChainB
Resolution2.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.2.22: rRNA N-glycosylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AZI B I93 L133 A134 I93 L133 A134
BS02 AZI B F29 N61 F29 N61
BS03 AZI B H30 D31 H30 D31
BS04 AZI B D235 Y249 D235 Y249
External links
PDB RCSB:1onk, PDBe:1onk, PDBj:1onk
PDBsum1onk
PubMed
UniProtP81446|ML1_VISAL Beta-galactoside-specific lectin 1

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