Structure of PDB 1odz Chain B

Receptor sequence
>1odzB (length=379) Species: 155077 (Cellvibrio japonicus) [Search protein sequence]
VKPVTVKLVDSQATMETRSLFAFMQEQRRHSIMFGHQHETTQGLTITRTD
GTQSDTFNAVGDFAAVYGWDTLSIVAPKAEGDIVAQVKKAYARGGIITVS
SHFDNPKTDTQKGVWPVGTSWDQTPAVVDSLPGGAYNPVLNGYLDQVAEW
ANNLKDEQGRLIPVIFRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYL
RDVKGVRNFLYAYSPNNFWDVTEANYLERYPGDEWVDVLGFDTYGPVADN
ADWFRNVVANAALVARMAEARGKIPVISGIGIRAPDIEAGLYDNQWYRKL
ISGLKADPDAREIAFLLVWRNAPQGVPGGTQVPHYWVPANRPENINNGTL
EDFQAFYADEFTAFNRDIEQVYQRPTLIV
3D structure
PDB1odz Expansion of the Glycosynthase Repertoire to Produce Defined Manno-Oligosaccharides
ChainB
Resolution1.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.78: mannan endo-1,4-beta-mannosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN B H143 E212 Y285 W360 W379 H102 E171 Y244 W319 W336
BS02 BMA B E121 W162 W360 R361 H377 E80 W121 W319 R320 H334
BS03 ZN B E67 H71 E26 H30
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787 hydrolase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0016985 mannan endo-1,4-beta-mannosidase activity
Biological Process
GO:0000272 polysaccharide catabolic process
GO:0006080 substituted mannan metabolic process
GO:0010391 glucomannan metabolic process
GO:0051069 galactomannan metabolic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1odz, PDBe:1odz, PDBj:1odz
PDBsum1odz
PubMed12841226
UniProtP49424|MANA_CELJU Mannan endo-1,4-beta-mannosidase (Gene Name=manA)

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