Structure of PDB 1nly Chain B

Receptor sequence
>1nlyB (length=323) Species: 85962 (Helicobacter pylori 26695) [Search protein sequence]
LSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICYNGNKV
VWVLKNNGEWQPFDVRDRKAFSLSRLMHFARCCASFKKKTIDNYENPILS
SNLANGERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLD
NKEQAISAIKDGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIE
DTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELRSSEAY
DFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFESLIEG
FKDLIDMIVHINHHKQCDEFYIK
3D structure
PDB1nly VirB11 ATPases are dynamic hexameric assemblies: New insights into bacterial type IV secretion
ChainB
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AGS B N61 R133 T180 G181 G183 K184 T185 T186 E248 K320 N56 R128 T175 G176 G178 K179 T180 T181 E243 K315
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0005515 protein binding
GO:0016887 ATP hydrolysis activity
GO:0046872 metal ion binding
Biological Process
GO:0044097 secretion by the type IV secretion system
Cellular Component
GO:0043684 type IV secretion system complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1nly, PDBe:1nly, PDBj:1nly
PDBsum1nly
PubMed12727865
UniProtQ7BK04

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