Structure of PDB 1mu7 Chain B

Receptor sequence
>1mu7B (length=434) Species: 9606 (Homo sapiens) [Search protein sequence]
LDKGNPFQFYLTRVSGVKPKYNSGALHIKDILSPLFGTLVSSAQFNYCFD
VDWLVKQYPPEFRKKPILLVHGDKREAKAHLHAQAKPYENISLCQAKLDI
AFGTHHTKMMLLLYEEGLRVVIHTSNLIHADWHQKTQGIWLSPLYPRIAD
GTHKSGESPTHFKANLISYLTAYNAPSLKEWIDVIHKHDLSETNVYLIGS
TPGRFQGSQKDNWGHFRLKKLLKDHASSMPNAESWPVVGQFSSVGSLGAD
ESKWLCSEFKESMLTLGSVPLYLIYPSVENVRTSLEGYPAGGSLPYSIQT
AEKQNWLHSYFHKWSAETSGRSNAMPHIKTYMRPSPDFSKIAWFLVTSAN
LSKAAWGALEKNGTQLMIRSYELGVLFLPSALGLDSFKVKQKFATFPVPY
DLPPELYGSKDRPWIWNIPYVKAPDTHGNMWVPS
3D structure
PDB1mu7 Insights Into Substrate Binding and Catalytic Mechanism of Human Tyrosyl-DNA Phosphodiesterase (Tdp1) from Vanadate- and Tungstate-Inhibited Structures
ChainB
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.4.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 WO4 B H263 K265 H493 K495 H106 K108 H327 K329
BS02 GOL B Y204 H263 N516 Y47 H106 N350
Gene Ontology
Molecular Function
GO:0008081 phosphoric diester hydrolase activity
Biological Process
GO:0006281 DNA repair
Cellular Component
GO:0005634 nucleus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1mu7, PDBe:1mu7, PDBj:1mu7
PDBsum1mu7
PubMed12470949
UniProtQ9NUW8|TYDP1_HUMAN Tyrosyl-DNA phosphodiesterase 1 (Gene Name=TDP1)

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