Structure of PDB 1kx5 Chain B

Receptor sequence
>1kx5B (length=102) Species: 8355 (Xenopus laevis) [Search protein sequence]
SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLI
YEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF
GG
3D structure
PDB1kx5 Solvent Mediated Interactions in the Structure of the Nucleosome Core Particle at 1.9 A Resolution
ChainB
Resolution1.94 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna B K5 T30 P32 R36 R45 K5 T30 P32 R36 R45
BS02 dna B K8 G9 K16 R17 H18 R19 R45 I46 G48 R78 K79 T80 K8 G9 K16 R17 H18 R19 R45 I46 G48 R78 K79 T80
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006334 nucleosome assembly
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:1kx5, PDBe:1kx5, PDBj:1kx5
PDBsum1kx5
PubMed12079350
UniProtP62799|H4_XENLA Histone H4

[Back to BioLiP]