Structure of PDB 1kb6 Chain B

Receptor sequence
>1kb6B (length=101) Species: 9606 (Homo sapiens) [Search protein sequence]
PRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITK
DNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSL
R
3D structure
PDB1kb6 Structural basis of VDR-DNA interactions on direct repeat response elements.
ChainB
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B F234 H235 F236 K245 R249 I294 L295 F14 H15 F16 K25 R29 I74 L75
BS02 dna B E242 R250 R273 R274 R280 E22 R30 R53 R54 R60
BS03 ZN B C224 C227 C241 C244 C4 C7 C21 C24
BS04 ZN B C260 C266 C276 C279 C40 C46 C56 C59
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
GO:0008270 zinc ion binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:1kb6, PDBe:1kb6, PDBj:1kb6
PDBsum1kb6
PubMed11980721
UniProtP11473|VDR_HUMAN Vitamin D3 receptor (Gene Name=VDR)

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